Cleavable Cross-Linkers and Mass Spectrometry for the Ultimate Task of Profiling Protein–Protein Interaction Networks in Vivo | Journal of Proteome Research
![PDF] Single-platform 'multi-omic' profiling: unified mass spectrometry and computational workflows for integrative proteomics-metabolomics analysis. | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/a99681b245131e0bc2523825fc0764e3de8c95c0/3-Figure1-1.png "PDF] Single-platform 'multi-omic' profiling: unified mass spectrometry and computational workflows for integrative proteomics-metabolomics analysis. | Semantic Scholar")
PDF] Single-platform 'multi-omic' profiling: unified mass spectrometry and computational workflows for integrative proteomics-metabolomics analysis. | Semantic Scholar
MASH Explorer
SPECTRUM – A MATLAB Toolbox for Proteoform Identification from Top-Down Proteomics Data | Scientific Reports
Efficient and robust proteome-wide approaches for cross-linking mass spectrometry | Nature Protocols
OpenMS: a flexible open-source software platform for mass spectrometry data analysis | Nature Methods
PDF) A Cross-platform Toolkit for Mass Spectrometry and Proteomics
135 Free Proteomics Tools - Software and Resources
Leveraging crosslinking mass spectrometry in structural and cell biology - ScienceDirect
![PDF] Single-platform 'multi-omic' profiling: unified mass spectrometry and computational workflows for integrative proteomics-metabolomics analysis. | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/a99681b245131e0bc2523825fc0764e3de8c95c0/2-Table1-1.png "PDF] Single-platform 'multi-omic' profiling: unified mass spectrometry and computational workflows for integrative proteomics-metabolomics analysis. | Semantic Scholar")
PDF] Single-platform 'multi-omic' profiling: unified mass spectrometry and computational workflows for integrative proteomics-metabolomics analysis. | Semantic Scholar
Viruses | Free Full-Text | Top-Down and Bottom-Up Proteomics Methods to Study RNA Virus Biology
Characterization of an A3G-VifHIV-1-CRL5-CBFβ Structure Using a Cross-linking Mass Spectrometry Pipeline for Integrative Modeling of Host–Pathogen Complexes - ScienceDirect
Protein Dynamics in Solution by Quantitative Crosslinking/Mass Spectrometry: Trends in Biochemical Sciences
Anatomy and evolution of database search engines—a central component of mass spectrometry based proteomic workflows - Verheggen - 2020 - Mass Spectrometry Reviews - Wiley Online Library
ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis | PLOS Computational Biology
The Crux toolkit for analysis of bottom-up tandem mass spectrometry proteomics data | bioRxiv
Discovery of Protein Modifications Using Differential Tandem Mass Spectrometry Proteomics | Journal of Proteome Research
Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery | Nature Communications
PDF) A Cross-platform Toolkit for Mass Spectrometry and Proteomics
Proteomes | Free Full-Text | mzStudio: A Dynamic Digital Canvas for User-Driven Interrogation of Mass Spectrometry Data
Exploring New Methods to Study and Moderate Proton Beam Damage for Multimodal Imaging on a Single Tissue Section | Journal of the American Society for Mass Spectrometry
Mass spectrometry‐based protein–protein interaction networks for the study of human diseases | Molecular Systems Biology
Biomedicines | Free Full-Text | Study on Tissue Homogenization Buffer Composition for Brain Mass Spectrometry-Based Proteomics
compareMS2 2.0: An Improved Software for Comparing Tandem Mass Spectrometry Datasets | Journal of Proteome Research
